PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009614314.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 440aa    MW: 49546.8 Da    PI: 4.6169
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009614314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM102.74.8e-32601991128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....s 80 
                     lp+G++F+Ptd+e++++ L k v   +      +  +e+i++vd    i++++P++Lp  v+++ +  +fF+++ k+y+tg+rk+r+++     +
  XP_009614314.1  60 LPRGVKFDPTDQEIIWHLLGK-VGVGNwnshpfI--DEFIPTVDeddgICYTHPQNLP-GVQQDGSVSHFFHRAVKAYNTGTRKRRKIHgdnfgD 150
                     799************766655.544443564332..334665544556**********.677788899******************865555558 PP

             NAM  81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      +W++tg++k+v+  +g + g+kk++v+y    +  k+ekt+Wvmh+y+l
  XP_009614314.1 151 VRWHKTGRTKPVIL-DGIQRGCKKIMVLYvsPIKGGKAEKTNWVMHQYHL 199
                     88************.99************6533777778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.98E-3946218IPR003441NAC domain
PROSITE profilePS5100530.81360218IPR003441NAC domain
PfamPF023651.0E-1361199IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MCYRFRRPSW LVDSKRIATK IKSASGDPGA VNWKSNPTKA CPNCQFIIDN NDVSNDWPGL  60
PRGVKFDPTD QEIIWHLLGK VGVGNWNSHP FIDEFIPTVD EDDGICYTHP QNLPGVQQDG  120
SVSHFFHRAV KAYNTGTRKR RKIHGDNFGD VRWHKTGRTK PVILDGIQRG CKKIMVLYVS  180
PIKGGKAEKT NWVMHQYHLG TGEDEREGEY VVSKVFYQQQ QQVKQGEKIE EELPEDSECL  240
VAKVDPHTPK SVTPEPPCGE RLSSSMDARQ QIAASGINPI TQFHDVDYIE DDMRALPEQT  300
ENQDQIIENQ IDETGTKVDN ETGDDPKWWD SESQYLLDSQ QLVEGLSLCD DLLASQSPNR  360
DGNENDKENS KPSLADYAQL GPEDLKKDLE ECQHLVLDPA NIDMDTPPDF RLSQLDFGSQ  420
DSYIAWGGSK FGFDSGEHGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754441e-178HG975444.1 Solanum pennellii chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009614314.10.0PREDICTED: NAC domain-containing protein 8 isoform X1
SwissprotQ6NQK20.0NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM0ZJN30.0M0ZJN3_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000021220.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81622430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-169NAC family protein